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. 2019 Apr 11;10(1):277–291. doi: 10.1080/21505594.2019.1593776

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© 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 1. — T. marneffei aspartyl protease encoding gene expansion.

A neighbor-joining relatedness tree of genes in the pop expansion as well as pepA orthologues in other Eurotiomycetidae species. Branch confidence values are bootstrap supports from 1000 pseudoreplicates. T. marneffei pepB is included as an outgroup. The grey shading denotes expanded pop clade in T. marneffei. The dashed line denotes shortened branch lengths. The arrowhead indicates the position of a predicted retrotransposition event. Species abbreviations are as follows: Ts, Talaromyces stipitatus; Tc, Talaromyces cellulolyticus; Tv, Talaromyces verruculosus; Te, Trichophyton equinum; Tt, Trichophyton tonsurans; An, Aspergillus nidulans; Pc, Penicillium chrysogenum; Af, Aspergillus fumigatus; Nf, Neosartorya fischeri; Ac, Aspergillus clavatus; At, Aspergillus terreus; Ao, Aspergillus oryzae; Aa, Aspergillus avus; Ur, Uncinocarpus reesei; Hc, Histoplasma capsulatum; Bd, Blastomyces dermatitidis.