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. Author manuscript; available in PMC: 2019 May 21.
Published in final edited form as: Nature. 2009 Aug 12;461(7262):361–366. doi: 10.1038/nature08319

Figure 4 |. The Get3 nucleotide sensor.

Figure 4 |

a, Key interactions within the composite ATP-binding site of one subunit (green) of the closed dimer. The essential catalytic residue Asp 57 coordinates the putative nucleophilic water molecule (red sphere, asterisk), adjacent to AlF4. The nucleotide makes further interactions with residues in the second subunit (blue), including the P-loop residue Lys 26. b, A coil-to-helix transition in the Switch II region (green and blue) is observed in the presence of ADP·AlF 4 relative to the nucleotide free state (grey subunit). Viewed ~180° from the orientation in c, looking along the dimer pseudo-two-fold axis, and coloured as in Fig. 1. Conserved, cross-monomer interactions between Switch II/α7 and the α-helical subdomain are disrupted in the open dimer (the second subunit of the nucleotide-free dimer is not visible here). c, The α-helical subdomains move apart in the open dimer (grey), and helices within each of the resulting ‘half-sites’ rearrange; helix α8, disordered in the closed dimer, inserts into the hydrophobic half-site to shield it from solvent.