Figure 7.

Characteristics and conservation of c‐di‐GMP‐metabolizing proteins. (a) Number of GGDEF/EAL domain‐containing proteins in genomes of Komagataeibacter spp. and Gluconacetobacter diazotrophicus PAl 5. Distinguished are the proteins containing both domains (in red) or only one (EAL in yellow; GGDEF—in blue). In gray are given single‐domain proteins encoded by genes that are located at contigs borders and therefore are of lower reliability (see Methods). (b). Genomes of the Acetobacter (A) and the Gluconobacter (G) genus. The strains were selected based on the completeness of their genome sequence (full genome, or less than 50 contigs). (c) Presence (green)/absence (gray) map of GGDEF/EAL domain‐containing proteins in the analyzed genomes. Orthologs of diguanylate cyclases (dgc) and phosphodiesterases (pde) identified earlier (Tal et al., 1998) are colored in orange and dark blue respectively. Dendrogram was generated based on hierarchical clustering analysis. Y‐axis: strains clustering; x‐axis: protein clustering