Table 4.
Transcript profiles of key genes involved in selected biological processes (P_14d_vs_F_14d.DEG_down).
| Category | Gene ID | Fold_change | Annotation |
|---|---|---|---|
| Nutrition | AT2G18700 | -2.028886206 | Enzyme putatively involved in trehalose biosynthesis |
| Stress response | AT1G66100 | -3.994840224 | Predicted pathogenesis-related protein. Belongs to the plant thionin (PR-13) |
| Stress response | AT3G62950 | -3.532537012 | Interact with the transcription factor TGA2 and suppress ORA59 promoter activity |
| Stress response | AT5G36910 | -2.260143639 | Predicted pathogenesis-related protein, belongs to the thionin (PR-13) family |
| Stress response | AT1G74930 | -4.834086289 | Member of the DREB subfamily A-5 of ERF/AP2 TF family |
| Stress response | AT5G06870 | -2.283070222 | Encodes a polygalacturonase inhibiting protein involved in plant defense response |
| Stress response | AT2G40000 | -2.230629738 | Defense response to bacterium, response to oxidative stress, SA, tryptophan |
| Stress response | AT1G74930 | -4.834086289 | Member of the DREB subfamily A-5 of ERF/AP2 TF family |
| Stress response | AT3G28740 | -2.618735627 | Member of the cytochrome p450 family, upregulated by cis-jasmonate treatment |
| Nutrition | AT3G57520 | -2.086920131 | α-galactosidase, breakdown raffinose into α-galatose and sucrose |
| Nutrition | AT4G13800 | -2.102460777 | Magnesium transporter NIPA |
| Phytohormone response | AT3G22275 | -2.610242773 | Jasmonate ZIM-domain (JAZ) protein 13, repressor of JA signaling |
| Phytohormone response | AT2G34600 | -2.824291768 | Jasmonate-ZIM-domain protein 7, JAZ7 |
| Phytohormone response | AT1G75470 | -5.252716971 | Purine transporter, transport of purine and derivatives such as cytokinins |
| Development | AT2G32290 | -2.128742351 | β-amylase 6 |
| Development | AT2G02710 | -2.26492202 | PAS/LOV protein, PLP, encodes a putative blue light receptor protein |
Genes differentially expressed in 14-day-old seedlings were functionally categorized according to gene ontology (GO) at the Arabidopsis Information Resource. The key components of selected biological processes are shown to estimate their biological relevance. Genes were chosen by fold change (FC) < -2 (paper tape-sealed seedlings compared to parafilm-sealed ones).