Table 8.
Comparison of observed genotypic diversity (H) and expected genotypic diversity (HEQ) at mutation-drift equilibrium based on the observed number of alleles with infinite number of alleles.
Zone | Test | Parameter | IAM | TPM | SMM | Mode |
---|---|---|---|---|---|---|
CZ | ST | Number of loci with heterozygosity excess expected | 6.35 | 6.86 | 7.22 | Shifted |
Loci with heterozygosity deficiency or excess | 1/13 (P = 0.00027) | 1/13 (P = 0.00070) | 1/13 (P = 0.00132) | |||
SDT | T2 values (Probability) | 4.024 (P = 0.00003) | 3.492 (P = 0.00024) | 3.168 (P = 0.00077) | ||
WT | One tail for H deficiency | P = 0.99997 | P = 0.99994 | P = 0.99991 | ||
One tail for H excess: | P = 0.00006 | P = 0.00009 | P = 0.00015 | |||
Two tails for H excess and deficiency: | P = 0.00012 | P = 0.00018 | P = 0.00031 | |||
NEPZ | ST | Number of loci with heterozygosity excess expected | 6.53 | 6.82 | 7.22 | Shifted |
Loci with heterozygosity deficiency or excess | 0/14 (P = 0.00002) | 1/13 (P = 0.00064) | 1/13 (P = 0.00130) | |||
SDT | T2 values (Probability) | 5.195 (P = 0.00000) | 4.575 (P = 0.00000) | 4.182 (P = 0.00001) | ||
WT | One tail for H deficiency | P = 1.00000 | P = 0.99997 | P = 0.99997 | ||
One tail for H excess: | P = 0.00003 | P = 0.00006 | P = 0.00006 | |||
Two tails for H excess and deficiency | P = 0.00006 | P = 0.00012 | P = 0.00012 | |||
NHZ | ST | Number of loci with heterozygosity excess expected | 6.32 | 6.75 | 7.10 | Shifted |
Loci with heterozygosity deficiency or excess | 1/14 (P = 0.00005) | 1/14 (P = 0.00012) | 1/14(P = 0.00024) | |||
SDT | T2 values (Probability) | 5.158 (P = 0.00000) | 4.635 (P = 0.00000) | 4.197 (P = 0.00001) | ||
WT | One tail for H deficiency | P = 0.99997 | P = 0.99995 | P = 0.99962 | ||
One tail for H excess: | P = 0.00005 | P = 0.00008 | P = 0.00050 | |||
Two tails for H excess and deficiency | P = 0.00009 | P = 0.00015 | P = 0.00101 | |||
NWPZ | ST | Number of loci with heterozygosity excess expected | 6.01 | 6.44 | 6.81 | Shifted |
Loci with heterozygosity deficiency or excess | 1/14(P = 0.00003) | 1/14 (P = 0.00006) | 1/14 (P = 0.00014) | |||
SDT | T2 values (probability) | 5.703 (P = 0.00000) | 5.161 (P = 0.00000) | 4.728 (P = 0.00000) | ||
WT | One tail for H deficiency | P = 0.99998 | P = 0.99998 | P = 0.99998 | ||
One tail for H excess: | P = 0.00003 | P = 0.00003 | P = 0.00003 | |||
Two tails for H excess and deficiency | P = 0.00006 | P = 0.00006 | P = 0.00006 |
CZ, Central zone; NEPZ, North East Plain zone; NHZ, North Hill zone; NWPZ, North Western Plain zone; ST, Sign rank Test; SDT, Standardized Differences Test; WT, Wilcoxon Test; IAM, Infinite allele model; TPM, Two Phase Model; SMM, Stepwise Mutation Model of Evolution.
Probability of deviation from mutation-drift equilibrium (H>HEQ) was determined according to Cornuet and Luikart (1996).