Table 2.
Primer | Sequence (5′–3′) | Target fragment length (bp) | Annealing temperature (°C) | References |
---|---|---|---|---|
HblA-F | GTGCAGATGTTGATGCCGAT | 320 | 55 | Hansen and Hendriksen, 2001 |
HblA-R | ATGCCACTGCGTGGACATAT | |||
HblC-F | AATGGTCATCGGAACTCTAT | 750 | 55 | Hansen and Hendriksen, 2001 |
HblC-R | CTCGCTGTTCTGCTGTTAAT | |||
HblD-F | AATCAAGAGCTGTCACGAAT | 430 | 55 | Hansen and Hendriksen, 2001 |
HblD-R | CACCAATTGACCATGCTAAT | |||
NheA-F | TACGCTAAGGAGGGGCA | 500 | 55 | Hansen and Hendriksen, 2001 |
NheA-R | GTTTTTATTGCTTCATCGGCT | |||
NheB-F | CTATCAGCACTTATGGCAG | 770 | 55 | Hansen and Hendriksen, 2001 |
NheB-R | ACTCCTAGCGGTGTTCC | |||
NheC-F | CGGTAGTGATTGCTGGG | 583 | 55 | Hansen and Hendriksen, 2001 |
NheC-R | CAGCATTCGTACTTGCCAA | |||
cytK-F | AAAATGTTTAGCATTATCCGCTGT | 238 | 55 | Oltuszak-Walczak and Walczak, 2013 |
cytK-R | ACCAGTTGTATTAATAACGGCAATC | |||
cesB-F | GGTGACACATTATCATATAAGGTG | 1271 | 58 | Ehling-Schulz et al., 2005 |
cesB-R | GTAAGCGAACCTGTCTGTAACAACA | |||
glpF-F | GCGTTTGTGCTGGTGTAAGT | 549 | 59 | PubMLST (http://pubmlst.org/bcereus/info/primers.shtml) |
glpF-R | CTG CAATCGGAAGGAAGAAG | |||
gmk-F | TTAAGTGAGGAAGGGTAGG | 600 | 56 | |
gmk-R | AATGTTCACCAACCACAA | |||
ilvD-F | GGGCAAACATTAAGAGAA | 556 | 58 | |
ilvD-R | TTCTGGTCGTTTCCATTC | |||
pta-F | AGAGCGTTTAGCAAAAGAA | 576 | 56 | |
pta-R | CAATGCGAGTTGCTTCTA | |||
pur-F | GCTGCGAAAAATCACAAA | 536 | 56 | |
pur-R | CACGATTCGCTGCAATAA | |||
pycA-F | GTTAGGTGGAAACGAAAG | 550 | 57 | |
pycA-R | CGTCCAAGTTTATGGAAT | |||
tpi-F | CCAGTAGCACTTAGCGAC | 553 | 58 | |
tpi-R | GAAACCGTCAAGAATGAT |