Table 1.

Datasets used for evaluation

Data set	Nodes	Edges (n)	Colors (m)	Colorings	Density (%) ($\frac{s}{nm}$)
Virus100	2,954,719	2,956,113	100	463	1.056
Virus1000	30,310,634	30,347,373	1,000	11,612	0.117
Virus50000	622,587,315	625,110,390	53,412	1,359,843	0.006
Lactobacillus	134,951,429	135,369,397	135	6,630	1.475
chr22+gnomAD	178,196,890	180,023,641	9	510	15.270
hg19+gnomAD	5,714,136,751	5,728,489,633	30	380,051	1.762

Columns represent number of nodes and edges per dataset, total number of colors and number of unique edge colorings, or unique rows of the annotation matrix, and density of the annotation matrices, where the quantity s refers to the number of set bits in the annotation matrices.