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. 2019 May 22;14(5):e0209140. doi: 10.1371/journal.pone.0209140

Fig 2. A.Br008/011 polytomy, minimum spanning tree, linear scale.

Fig 2

The color coding reflects the lineages within the A.Br.008/011 polytomy using the previously defined classification [38]. Geographic origin is indicated when known. The root (red star) is defined using the Ames ancestor reference genome. One strain representing the A.Br011/009 lineage is included. Branch lengths along the longest and shortest root-to-tip paths (bold branches) are indicated. The tree is based upon 1825 SNPs, and the level of homoplasia is 0.7% (the size of the tree is 1838). The list of strains used to make the figure is provided in S1 Table.