FIG 7.

Ethanol-responsive genes are enriched for those with overlapping AlgU and QS control. eADAGE gene-gene network analysis shows ethanol-responsive genes and the QS regulon, with overlapping AlgU genes indicated. (I) Enrichment region for genes coordinately regulated by AlgU and QS (green) and ethanol-responsive genes (orange outline). (II) Enrichment region for “canonical” quorum-sensing genes, including lasI, lasB, rhlR, rhlI, and rhlA. (III) Enrichment region for QS genes within the RpoS regulon.