Table 2.
Sample | Yield (Mbp) | N Reads | %Q30 | Mean Q | N Reads after trimming | % Mapping |
---|---|---|---|---|---|---|
CAF1 | 8.297 | 33,187,088 | 94.98 | 35.76 | 30,158,494 | 71.4 |
CAF2 | 7.166 | 28,665,463 | 94.84 | 35.7 | 26,025,539 | 70.9 |
CAF3 | 6.782 | 27,126,385 | 94.96 | 35.75 | 24,736,334 | 71.5 |
COF1 | 9.01 | 36,040,513 | 95.38 | 35.8 | 32,867,578 | 69.7 |
COF2 | 11.272 | 45,089,307 | 95.29 | 35.78 | 41,064,935 | 70.2 |
COF3 | 6.922 | 27,686,685 | 95.38 | 35.81 | 25,285,497 | 73 |
Yield (Mbp) number of bases in mega bases, Q quality score, %Q30 percentage of bases with a quality score of at least 30. CAF cold acclimated females, COF Control Females