Table 3.
Single SNP Associations
| Allele frequencies: case, control (X2, P value)
|
|||||
|---|---|---|---|---|---|
| SNP | Major allele | Hispanic Whites | Non-Hispanic Whites | African-American | Others |
| rs28945096 | T | 0.98, 0.98 (0.00, .98) | 1.00, 0.99 (0.78, .38) | 0 | 0 |
| rs28945095 | C | 1.00, 0.98 (1.01, .32) | 0 | 0 | 0 |
| rs28945094 | T | 1.00, 0.98 (0.98, .32) | 1.00, 0.95 (3.17, .07) | 0 | 0.90, 1.00 (1.05, .30) |
| PAX3_C701A | C | 0 | 0.99, 1.00 (1.24, .26) | 0 | 0 |
| rs28945093 | A | 0 | 0.99, 0.99 (0.02, .88) | 0 | 0 |
| rs28945092 | C | 0 | 0 | 1.00, 0.88 (0.81, 0.37) | 0 |
| rs12623857 | T | 0.97, 0.90 (2.07, .15) | 0.85, 0.91 (1.04, .31) | 0.67, 0.88 (0.88 , 0.35) | 1.00, 0.88 (1.32, .25) |
| PAX3_G-396C | G | 0 | 0 | 0.83, 1.00 (1.44, 0.23) | 0 |
| rs28945091 | C | 0.95, 0.98 (1.03, .31) | 0 | 0 | 0 |
| PAX3_G-569C | G | 0 | 0.99, 1.00 (1.07, .30) | 0 | 0 |
| rs28945090 | G | 1.00, 0.98 (1.01, .32) | 0 | 0 | 0 |
| rs28945089 | C | 0.59, 0.58 (2.67, .10) | 0 | 0 | 0.80, 0.50 (1.8, .18) |
| rs28945668 | C | 0 | 1.00, 0.99 (0.80, .37) | 0 | 0 |
| rs28945088 | C | 0 | 1.00, 0.99 (0.69, .41) | 0 | 0 |
| rs28945087 | C | 0 | 1.00, 0.99 (0.74, .39) | 0 | 0 |
| rs28945086 | T | 0 | 1.00, 0.99 (0.82, .37) | 0 | 0 |
| rs16863657 | T | 0.60, 0.82 (6.82, .01*) | 0.81, 0.82 (0.02, .90) | 0 | 0.80, 0.80 (0.39, .53) |
| rs28945085 | C | 0.98, 0.93 (2.11, .15) | 0.92, 0.94 (0.31, .58) | 0.83, 1.00 (1.44, 0.23) | 0 |
*
P < .01.