Antibodies |
|
Monoclonal anti-HIV-1 Env PGT145 |
Produced in house; Walker et al., 2011
|
NA |
Monoclonal anti-HIV-1 Env PG9 |
Produced in house; Walker et al., 2009
|
NA |
Monoclonal anti-HIV-1 Env PG9 iGL |
Produced in house; This paper |
N/A |
Monoclonal anti-HIV-1 Env CAP256.09 |
Produced in house; Doria-Rose et al., 2014
|
N/A |
Monoclonal anti-HIV-1 Env CAP256 UCA |
produced in house; Doria-Rose et al., 2014
|
N/A |
Monoclonal anti-HIV-1 Env CH01 |
Produced in house; Bonsignori et al., 2011
|
N/A |
Monoclonal anti-HIV-1 Env CH01 iGL |
Produced in house; This paper |
N/A |
HIV mAbs |
NIH AIDS Reagent Program or various research laboratories |
N/A |
Alkaline Phosphatase-AffiniPure Goat Anti-Human IgG, Fc Fragment Specific |
Fisher Scientific |
Cat# 109-055-098 |
|
Bacterial and Virus Strains |
|
BG505_W6M_C2 |
NIH AIDS Reagent Program |
N/A |
MT145K |
This paper |
N/A |
Q23_17 |
NIH AIDS Reagent Program |
N/A |
WITO4160_33 |
NIH AIDS Reagent Program |
N/A |
C1080_C3 |
NIH AIDS Reagent Program |
N/A |
ZM233_6 |
NIH AIDS Reagent Program |
N/A |
12 virus panel – global isolates |
NIH AIDS Reagent Program |
N/A |
|
Chemicals, Peptides, and Recombinant Proteins |
|
X-tremeGENE 9 DNA Transfection Reagent |
Sigma-Aldrich |
Cat# 6365809001 |
PEI MAX 40000 |
Polysciences, Inc. |
Cat# 24765-1 |
Galanthus nivalis lectin (snow drop),agarose bound |
Vector Labs |
Cat#AL-1243 |
DEAE-Dextran |
Sigma-Aldrich |
Cat# D9885-10G |
GAB1 SOSIP.664 |
This paper |
N/A |
MB897 SOSIP.664 |
This paper |
N/A |
EK505 SOSIP.664 |
This paper |
N/A |
MT145 SOSIP.664 |
This paper |
N/A |
MT145K SOSIP.664 |
This paper |
N/A |
|
Critical Commercial Assays |
|
QuikChange II XL Site-Directed Mutagenesis Kit |
Agilent Technologies |
Cat# 200522 |
Bright-Glo Luciferase Assay System |
Promega |
Cat# E2610 |
|
Deposited Data |
|
MT145K structure |
This study |
EMDB # EMD-20074 PDB # 6OHY
|
|
Experimental Models: Cell Lines |
|
HEK293T |
ATCC |
Cat# CRL-3216 |
FreeStyle 293-F |
Thermo Fisher Scientific |
Cat# R79007
|
TZM-bl cells |
NIH AIDS Reagent Program |
Cat# 8129 |
|
Experimental Models: Organisms/Strains |
|
CH01 UCA HC-only knock-in mouse model |
This study |
NA |
|
Recombinant DNA |
|
pSG3Δenv plasmid |
NIH AIDS Reagent Program |
Cat# 11051 |
|
Software and Algorithms |
|
Prism v7.0 |
GraphPad |
https://www.graphpad.com/scientific-software/prism/ |
UCSF Chimera |
Pettersen et al., 2004 |
N/A |
|
Other |
|
Superdex 200 Increase 10/300 GL column |
GE Healthcare |
Cat# 28990944 |
Anti-human IgG Fc Capture (AHC) Biosensors |
ForteBio |
Cat#18-5060 |
Titan Krios |
Thermo Fisher Scientific |
N/A |
K2 Summit |
Gatan |
N/A |
Motioncor2 |
Zheng et al., 2017 |
N/A |
GCTF |
Zhang, 2016 |
N/A |
Relion |
Scheres, 2012 |
N/A |
Rosetta |
Rosetta Commons |
https://www.rosettacommons.org/ |
Coot |
Emsley and Cowtan, 2004 |
N/A |