Table 3.
Methylation level of each CG site in the CpG island regions of HOXA2 gene in 9 paired colorectal adenocarcinoma samples and adjacent non-tumor colonic tissue samples.
| Target | Position | Type | P-value(T-test) | OR(L95-U95)(Logistic) | MethylDiff | C mean | N mean |
|---|---|---|---|---|---|---|---|
| HOXA2_ | 23 | CG | 0.0184384 | 1.0836(1.0020–1.1718) | 0.233133 | 0.497291 | 0.264158 |
| HOXA2_ | 26 | CG | 0.0131794 | 1.0982(1.0047–1.2004) | 0.246741 | 0.442534 | 0.195793 |
| HOXA2_ | 29 | CG | 0.0175961 | 1.0853(1.0036–1.1738) | 0.239593 | 0.4711 | 0.231507 |
| HOXA2_ | 36 | CG | 0.0097988 | 1.1067(1.0055–1.2181) | 0.260802 | 0.441725 | 0.180923 |
| HOXA2_ | 44 | CG | 0.0116775 | 1.1049(1.0060–1.2136) | 0.239451 | 0.401936 | 0.162485 |
| HOXA2_ | 46 | CG | 0.0138777 | 1.0922(1.0043–1.1879) | 0.243499 | 0.448467 | 0.204969 |
| HOXA2_ | 54 | CG | 0.0132013 | 1.0891(1.0062–1.1789) | 0.24928 | 0.437937 | 0.188657 |
| HOXA2_ | 56 | CG | 0.0099816 | 1.1039(1.0047–1.2129) | 0.269025 | 0.424603 | 0.155577 |
| HOXA2_ | 63 | CG | 0.0164194 | 1.0872(1.0032–1.1782) | 0.238949 | 0.449903 | 0.210954 |
| HOXA2_ | 73 | CG | 0.0117399 | 1.0918(1.0033–1.1882) | 0.228761 | 0.506655 | 0.277894 |
| HOXA2_ | 77 | CG | 0.0089776 | 1.0912(1.0052–1.1845) | 0.242318 | 0.520224 | 0.277905 |
| HOXA2_ | 83 | CG | 0.0134568 | 1.0944(1.0045–1.1923) | 0.244307 | 0.471639 | 0.227332 |
| HOXA2_ | 86 | CG | 0.0127031 | 1.0962(1.0046–1.1962) | 0.241186 | 0.458494 | 0.217308 |
| HOXA2_ | 91 | CG | 0.0107993 | 1.0890(1.0052–1.1798) | 0.229304 | 0.503858 | 0.274554 |
| HOXA2_ | 104 | CG | 0.0179164 | 1.0826(1.0026–1.1690) | 0.204942 | 0.481185 | 0.276243 |
| HOXA2_ | 153 | CG | 0.024104 | 1.0787(1.0004–1.1632) | 0.190415 | 0.45092 | 0.260505 |
| HOXA2_ | 165 | CG | 0.0092004 | 1.0988(1.0049–1.2016) | 0.225584 | 0.517545 | 0.291961 |
| HOXA2_ | 168 | CG | 0.051281 | 1.0790(0.9932–1.1723) | 0.136829 | 0.368444 | 0.231616 |
| HOXA2_ | 203 | CG | 0.015797 | 1.0829(1.0024–1.1698) | 0.219589 | 0.530772 | 0.311183 |