Table 2. Estimation of year of MRCA of EV-A71 subgenogroup C1v2015 lineage by using different enteroviruses*.
Node† | Year of MRCA (95% HPD interval) |
|
---|---|---|
Genomic region P1 | 3Dpol gene | |
1‡ | 2013.6 (2013.2–2014.1) | 2013.6 (2012.9–2014.3) |
2§ | 2010.2 (2009–2011.3) | 2004.1 (2001.7–2006.2) |
3¶ | 2000.5 (2000.1–2001.6) | ND |
Root | 1986 (1984.7–1987.3) | ND |
*EV-A71, enterovirus A71; HPD, highest probability density; MRCA, most recent common ancestor; ND, not done. †MRCAs were determined for nodes and root in Figure 2. ‡Node 1 represents the MRCA of all included EV-A71 C1v2015 isolates except the virus from patient 14. §For genomic region P1, node 2 represents the MRCA of all EV-A71 C1v2015 isolates, including the virus from patient 14. For 3Dpol gene, node 2 represents the MRCA of EV-A71 C1v2015 and its parent C1 lineage. ¶Node 3 represents the MRCA of EV-A71 C1v2015 and its parent C1 lineage.