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. Author manuscript; available in PMC: 2020 Mar 12.
Published in final edited form as: J Chem Theory Comput. 2019 Feb 11;15(3):1848–1862. doi: 10.1021/acs.jctc.8b01018

Table 1:

Data summary for simulations of T4 Lysozyme L99A with p-xylene from alternate starting conformations.

Method
[Starting Conformation]
Acceptance
Rate
# of Trans Time (ns) FEs (106) Trans/
106 FEs
MD [T0]
Blues [T0]
n/a
0.11%
15
91
60.0
27.7
30.0
23.9
0.5
3.8
MD [T250]
Blues [T250]
n/a
0.04%
0
47
60.0
25.3
30.0
22.7
0.0
2.1
MD [T1000]
Blues [T1000]
n/a
0.08%
0
30
60.0
24.8
30.0
22.5
0.0
1.3