Table 2. Single nucleotide polymorphism (SNP) for metal tolerance protein genes in three thousand rice genotypes.
| S. No. |
Gene name | Locus ID1 | Non-syn/syn2 | Total SNPs |
|---|---|---|---|---|
| 1 | OsMTP1 | Os05g03780 | 0/2 | 17 |
| 2 | OsMTP5 | Os02g58580 | 1/2 | 34 |
| 3 | OsMTP6 | Os03g22550 | 0/2 | 12 |
| 4 | OsMTP7 | Os04g23180 | 3/2 | 61 |
| 5 | OsMTP8 | Os02g53490 | 0/1 | 8 |
| 6 | OsMTP8.1 | Os03g12530 | 4/5 | 26 |
| 7 | OsMTP9 | Os01g03914 | 0/7 | 117 |
| 8 | OsMTP11 | Os01g62070 | 1/0 | 30 |
| 9 | OsMTP11.1 | Os05g38670 | 6/1 | 29 |
| 10 | OsMTP12 | Os08g32650 | 6/1 | 29 |
1Locus ID from Rice Genome Annotation Project with prefix “LOC_”
2Non-synonymous/synonymous