Table 3. Genetic diversity analysis of MTP genes in three thousand rice genotypes.
Gene Name | Chrno. | Start Chr. Position | End Chr. Position | Site Count |
Avg. Site Count |
Seg Sites | Pi Per BP | Theta Per BP |
Tajima’s D |
---|---|---|---|---|---|---|---|---|---|
OsMTP1 | 5 | 1675512 | 1679044 | 57 | 51.13 | 20 | 0.117 | 0.041 | 3.976 |
OsMTP5 | 2 | 35807206 | 35812237 | 89 | 77.96 | 40 | 0.157 | 0.053 | 4.773 |
OsMTP6 | 3 | 12955037 | 12958282 | 43 | 41.37 | 17 | 0.080 | 0.046 | 1.550 |
OsMTP7 | 4 | 13176843 | 13183039 | 112 | 98.60 | 69 | 0.170 | 0.073 | 3.477 |
OsMTP8 | 2 | 32721134 | 32723722 | 37 | 34.52 | 34 | 0.122 | 0.108 | 0.321 |
OsMTP8.1 | 3 | 6636642 | 6641479 | 47 | 43.60 | 31 | 0.156 | 0.077 | 2.396 |
OsMTP9 | 1 | 1673117 | 1680615 | 476 | 429.24 | 152 | 0.065 | 0.038 | 1.953 |
OsMTP11 | 1 | 35916773 | 35921961 | 72 | 70.20 | 35 | 0.108 | 0.057 | 2.161 |
OsMTP11.1 | 5 | 22670969 | 22674617 | 64 | 59.76 | 36 | 0.104 | 0.066 | 1.368 |
OsMTP12 | 8 | 20219095 | 20221976 | 106 | 97.08 | 46 | 0.085 | 0.051 | 1.672 |