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. Author manuscript; available in PMC: 2020 Jun 1.
Published in final edited form as: Bioessays. 2019 May 16;41(6):e1900004. doi: 10.1002/bies.201900004

Figure 2.

Figure 2

Example of data flow in an image processing pipeline. From left to right: the raw image of the field of view is loaded and pre-processed. Cells are extracted from such field of view and are then analyzed to find the number specific features within. A quality control image is generated to inspect if the cells are properly located and if the bright locations are properly identified. All cell counts within the fields of view of the experiment are aggregated into a CSV file and plotted in a histogram.