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. 2019 May 29;20(Suppl 10):244. doi: 10.1186/s12859-019-2808-3

Table 1.

The description of features with an example that extracted from a biomedical sentence by an entity and relation extraction tool, PKDE4J

No Biomedical features Description Example feature record
1 ID Identifier number of an article 15248468
2 Sent ID Sentence id of a sentence 0
in the abstract of an article
3 Entity-L Entity on the left side dehydroepiandrosterone sulfate
4 Type-L Type of the entity on the left side COMPOUND
5 Context-L Context of the entity on the left side NA;
6 Entity-R Entity on the right side ubiquinone-9
7 Type-R Type of the entity on the right side COMPOUND
8 Context-R Context of the entity on the right side NA
9 Negation Negativeness of the relation POSITIVE
10 Tense Tense of the relation ACTIVE
11 Verb Verb of the relation increase
12 Relation Reference word of the relation LOCATION_OF
13 Context level Level of the context in the relation level=0
14 Verb phrase Verb phrase increases hepatic ubiquinone-9 in
male F-344
15 Sentence Raw text of a sentence Dehydroepiandrosterone sulfate
increases hepatic ubiquinone-9
in male F-344 rats