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. 2019 May 16;24:103994. doi: 10.1016/j.dib.2019.103994

Table 4.

Summary of docking analysis with fat and obesity protein (PDB ID 3LFM).

Sr. No. Ligand Score Interacting Residues Bond Type Bond Distance
1 Riboflavin −27.3248 ARG 96 HB 1.62
SER 229 HB 2.07
GLU 234 HB 2.01
Ar HB 2.35
2 Niacin −21.5279 ARG 322 HB 1.93
GLU 234 HB 1.84
ARG 96 Pi-Pi Stacking 4.26
3 Thiamine −19.313 TRY 108 Pi-Pi Stacking 4.78
HIP 231 Pi-Pi Stacking 3.68
Pi-Pi Stacking 5.45
Pi Cation 4.42
Pi Cation 3.78
SER 229 HB 1.38
TYR 106 HB 2.00
4 Ascorbic acid −16.8546 ASP 233 HB 1.99
ARG 322 HB 2.45
ARG 96 HB 1.99
GLU 234 HB 1.90
5 Cyanidine 3, 5 diglucoside −14.6454 ARG 322 Pi Cation 5.23
HB 1.52
TRY 106 HB 2.08
HB 1.81
HIP 232 HB 1.82
GLU 234 HB 2.25
HIP 231 Pi-Pi Stacking 4.81
Pi-Pi Stacking 5.43
VAL 94 HB 1.53
6 Quercetin 3,4′ diglucoside −12.747 VAL 94 HB 2.35
GLU 234 HB 2.00
HIP 232 HB 1.57
HB 1.91
GLN 306 HB 2.18
HIP 231 Pi Cation 6.38
7 8 nonynoic acid −12.149 ASN 205 HB 1.96
ARG 322 HB 2.05
Salt bridge 3.78
ARG 96 HB 1.78
8 9 Decynoic acid −11.8069 ARG 322 HB 1.97
GLU 234 HB 1.97
9 Quercetin 3,3′ diglucoside −11.2637 TYR 108 Pi-Pi Stacking 4.55
ARG 96 HB 2.66
VAL 94 HB 1.79
ALA 227 HB 2.24
GLU 234 HB 1.62
10 Quercetin 3,7 diglucoside −7.7494 GLU 234 HB 2.04
HB 2.16
TYR 108 Pi-Pi Stacking 4.94
TYR 106 HB 2.29
ARG 322 HB 1.71
HIP 231 Pi-Pi Stacking 3.98
HIP 232 HB 2.06
11 Methyl 8-oxooctadec-9-ynoate −6.5642 HIP 232 HB 1.93
ARG 96 HB 1.52
12 Methyl Dec-9-ynoate −4.8041 ARG 96 HB 2.15
13 Methyl non-8-ynoate −4.4543 ARG 96 HB 2.15
14 (9) Methyl (E)-11-methoxy-9-oxononadec-10-enoate −2.4721 ARG 96 HB 2.15
15 Beta rosasterol −1.029 VAL 94 HB 1.78
16 Methyl Sterculate 0.5157 ARG 96 HB 1.84
17 Methyl malvalate 0.7329 ARG 96 HB 1.88
18 Beta sitosterol 1.2521 ALA 227 HB 2.2
19 Campesterol 1.447 ALA 227 HB 2.21
20 Orlistat −7.2466 ARG 322 HB 2.20
GLU 234 HB 2.04
HB 1.66
HIP 232 HB 2.17

Orlistat, as only standard drug used in market is used as standard reference for docking studies. Hence the docking result of orlistat in all tables is bold for ease of comparison.