Table 2.
Templates used in homology modeling of protein complexes. More detailed data are in the Supplementary Materials (Table S1).
| Modeled Structure | Template Structure | |||
|---|---|---|---|---|
| Complex | Chain/Counterpart | PDB ID/chain ID | Protein Name | Reference |
| Sensory module dimers | chains AB | 3T4L/AB | AHK4 | [4] |
| HisKA domain dimers | chains AB | 4MT8/AB | ERS1 | [6] |
| HKrd–HPt complexes | HKrd (chainA) | 3MMN/A | CKI1 | [17] |
| 4EUK/A | CKI2(AHK5) | [19] | ||
| HPt (chain B) | 4EUK/B | AHP1 | [19] | |
| HPt–HPt dimers | chains AB | 1YVI/AB | OsHP1 | [23,24] |
| RRrd–HPt complexes | RRrd (chain A) | 1CHN/A | CheY | [38] |
| 4EUK A | CKI2(AHK5) | [19] | ||
| HPt (chain B) | 4EUK B | AHP1 | [19] | |