Table 2.
Biological Functional Analysis of Venn Database
| UP | DOWN | |
|---|---|---|
| Total DES (1, 2 and 6 h) Unannotated Sequences |
4308 (61%) | 2794 (39%) |
| 508 (11.8%) | 462 (16.6%) | |
| Total DES | ||
| Key Word Search | UP | DOWN |
| Kinase | 395 | 176 |
| Mitogen activated protein/ MAPK | 20 | 4 |
| Phosphatase | 54 | 22 |
| Receptor | 265 | 111 |
| LRR receptor | 62 | 21 |
| Transcription | 211 | 88 |
| Transcription factor | 172 | 77 |
| WRKY | 27 | 7 |
| Heat shock/chaperone | 91 | 20 |
| Protease/proteinase/peptidase | 81 | 39 |
| Chloroplast/chloroplastic | 253 | 220 |
| Membrane | 53 | 22 |
| Channel | 31 | 8 |
| ABC transporter | 46 | 21 |
| Transport | 168 | 90 |
| Transferase | 189 | 132 |
| Reductase | 71 | 47 |
| Synthase | 127 | 67 |
| Oxidase | 82 | 48 |
| Peroxidase | 28 | 13 |
| P450 | 58 | 23 |
| Dehydrogenase | 53 | 29 |
| Calcium/calmodulin | 64 | 10 |
| IAA/auxin | 30 | 8 |
| Cytokinin | 10 | 1 |
| Salicylate/salicylic | 9 | 0 |
| Ethylene | 44 | 6 |
| ABA | 7 | 2 |
| Gibberellin | 12 | 1 |
| Lipoxygenase | 23 | 0 |
| Jasmonate/jasmonic | 6 | 0 |
| Lipase | 30 | 15 |
| Phospholipase A | 5 | 0 |
| Hydroperoxide lyase | 1 | 0 |
| Cellulose synthase | 15 | 10 |
| Proline | 17 | 21 |
| glycine betaine/proline transporter | 0 | 4 |
| phenylalanine ammonia-lyase | 18 | 1 |
| Glucanase | 11 | 4 |
| Ferric reductase oxidase | 0 | 11 |
| Expansin | 3 | 11 |
| GTP | 9 | 6 |
| Dehydrin | 2 | 0 |
| Thioredoxin | 7 | 1 |
| Allene oxidase | 6 | 0 |
| Allene cyclase | 1 | 0 |
| aminocyclopropane | 5 | 3 |