| Antibodies |
| Mouse anti-rat CD68 |
Bio-Rad |
Cat#MCA341R; RRID: AB_2291300 |
| Rat IL-1 beta/IL-1F2 DuoSet ELISA |
R & D Systems |
Cat#DY501-05 |
| Rat Lipocalin-2/NGAL DuoSet ELISA |
R & D Systems |
Cat#DY3508 |
| Anti-rat IgG HRP-conjugated |
Jackson lab |
Cat#112-035-003; RRID: AB_2338128 |
| Chemicals, Peptides, and Recombinant Proteins |
| (±)-1,3-Butanediol |
Sigma-Aldrich |
Cat#B84785
|
| Fluorescein isothiocyanate-dextran (4KDa) |
Sigma-Aldrich |
Cat#FD4 |
| Trizol reagent |
Invitrogen |
Cat#15596-026 |
| Lipopolysaccharide from E. coli 0128:B12 |
Sigma-Aldrich |
Cat#L2887 |
| Flagellin from Salmonella typhimurium (SLC3201, fljB-strain) |
Ziegler et al., 2008 |
N/A |
| Critical Commercial Assays |
| QuanTtest Red Total Protein Assay kit |
Quantimetrix |
Cat#2210-02 |
| βOHB Colorimetric Assay kit |
Cayman Chemicals |
Cat#700190 |
| QIAampPowerFecalDNA kit |
QIAGEN |
Cat#12830-50 |
| MiSeq Reagent Kit v3 |
Illumina |
Cat#MS-102-3003 |
| Nextera XT Index Kit |
Illumina |
Cat#FC-131-1002 |
| DuoSet ELISA Ancillary Reagent Kit 2 |
R & D Systems |
Cat#DY008 |
| VECTASTAIN Elite ABC HRP Kit (Peroxidase, Standard) |
Vector Lab |
Cat#PK-7200 |
| DAB Peroxidase (HRP) Substrate Kit (with Nickel), 3,3′-diaminobenzidine |
Vector Lab |
Cat#SK-4100 |
| Deposited Data |
| Raw and analyzed data |
This paper |
Mendeley Data. https://data.mendeley.com/datasets/4tt4hcmxr4/1
|
| Untargeted metabolomics data |
This paper |
Metabolics Workbench (study number: ST001051). http://dev.metabolomicsworkbench.org:22222/data/DRCCMetadata.php?Mode=Study&DataMode=ProjectData&StudyID=ST001051&StudyType=MS&ResultType=5#DataTabs
|
| Experimental Models: Organisms/Strains |
| Dahl Salt sensitive rats/JR |
University of Toledo |
https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=69369 |
| Oligonucleotides |
| See Table S2 for the primer sequences. |
This paper |
N/A |
| Software and Algorithms |
| Dataquest A.R.T. software v4.2 |
Data Science Int. |
https://www.datasci.com/ |
| USEARCH |
Edgar, 2010 |
https://www.drive5.com/usearch/ |
| QIIME software v1.9.1 |
Caporaso et al., 2010 |
http://qiime.org/ |
| LEfSe |
Segata et al., 2011 |
https://huttenhower.sph.harvard.edu/galaxy/ |
| PICRUSt |
Langille et al., 2013 |
http://picrust.github.io/picrust/ |
| HUMAnN |
Abubucker et al., 2012 |
http://huttenhower.sph.harvard.edu/humann |
| Greengenes |
DeSantis et al., 2006 |
http://greengenes.lbl.gov/Download/ |
| MetaboAnalyst |
Xia et al., 2009 |
http://www.metaboanalyst.ca/ |
| MassHunter Quantitative Analysis B.06.00 Service Pack 1 |
Agilent |
https://www.agilent.com/en/support/softwareinformatics/quant-b-0600-sp1 |
| GraphPad Prism v5.02 |
GraphPad software |
https://www.graphpad.com/ |
| Other |
| Harlan Teklad low salt diet |
Envigo |
Cat#TD7034 |
| Harlan Teklad high salt diet |
Envigo |
Cat#TD94217 |
| Radiotelemetry transmitters |
Data Science Int. |
PA-C10 |
| SpectraMax M3 |
Molecular Devices |
N/A |
| AU680 Chemistry Analyzer |
Beckman Coulter |
N/A |
| Nanodrop 2000 |
Thermo Scientific |
N/A |
| MiSeq system |
Illumina |
N/A |
| VS120 Virtual Slide Microscope |
Olympus |
N/A |
| Bioanalyzer |
Agilent |
N/A |
| Agilent 6410 triple quadrupole mass spectrometer |
Agilent |
N/A |
| Agilent 1290 infinity HPLC system with UPLC BEH C18 column |
Agilent |
N/A |
