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. 2019 May 7;8:e45644. doi: 10.7554/eLife.45644

Table 3. Potential amino acid substitutions detected in the samples analysed in this study, compared to the reference Hic74 sequence [Hyriopsis cumingii].

Positions are derived from the sequence alignment shown in Figure 6. Dashes indicate that the position was not covered for that sample; question mark symbols indicate ambiguous substitutions. Hic74 coverages for each sample and supporting product ion spectra are presented in Figure 6—figure supplement 1, Figure 6—figure supplement 2, Figure 6—figure supplement 3, Figure 6—figure supplement 4, Figure 6—figure supplement 5, Figure 6—figure supplement 6, Figure 6—figure supplement 7, Figure 6—figure supplement 8, Figure 6—figure supplement 9, Figure 6—figure supplement 10, as well as in Figure 6—source data 1.

Hic74 [Hyriopsis cumingii] A A A A A A A G D G S E G A A L V G L I A G A Q R E
AA position 83 85 91 93 106 108 110 111 151 152 163 172 175 282 283 284 289 292 306 310 403 801 804 821 822 827
U. crassus - - A A A A A G D G - Q G A ? L ? G L F A - - Q R E
U. pictorum - - ? ? ? - - - - - - Q G - - - - - L F ? S S Q R E
M. margaritifera - - - A - - - - - - - Q G - A L L G L F A - - Q R E
P. auricularius - A A A A A A - ? ? D E L - A F V E F I - - - H H D
HavA A S A A A ? ? A - - - Q G A A L L G L F - - - Q G E
HavB ? S A A A V - - - - - - - - A L L G L F - - - Q G E
HavC ? S A A A V ? A D G G - G ? A L L G L F - G S Q G E