Table 2.
Genes involved in cold adaptation and oxidative stress found in Pseudomonas sp. MPC6.
| Category and gene | Locus tag | Function/Description |
|---|---|---|
| Cold shock proteins | ||
| cspA_1, cspA_2, capB_1, capB_2, cspD | MPC6_1161, MPC6_4988, MPC6_1237, | Cold shock proteins |
| MPC6_2014, MPC6_4244 | ||
| Heat shock proteins | ||
| hslR, ibpA | MPC6_360, MPC_1942 | Heat shock proteins |
| Oxidative stress | ||
| cat, katE, katG | MPC6_5660, MPC6_198, MPC6_2528 | Catalase |
| srpA, tpx | MPC6_1816, MPC6_3164 | Peroxidase |
| ahpF, ahpC_1, ahpC_2 | MPC6_3361, MPC6_5109, MPC6_3360 | Alkyl hydroperoxide reductase |
| sodB_1, sodB_2, sodC | MPC6_5073, MPC6_5372, MPC6_2518 | Superoxide dismutase [Cu-Zn]/[Fe]/[Mn/Fe] |
| trxA, trxC, btuE | MPC6_6144, MPC6_530, MPC6_5341 | Thioredoxin |
| ggt_1, ggt_2, gloB_1, gloB_2, gloB_3, gloB_4, gloC | MPC6_936, MPC6_4218, MPC6_3235 | Glutathione hydrolase |
| MPC6_3293, MPC6_3654, MPC6_4725, MPC6_988 | ||
| frmA_1, frmA_2, frmA_3 | MPC6_1199, MPC6_3480, MPC6_4183 | Glutathione dehydrogenase |
| yfcF, gstB_1, gstB_2, MPC6_06172 | MPC6_5240, MPC6_1445, MPC6_4938, MPC6_6172 | Glutathione S-transferase |
| gsiC_1, gsiC_2, gsiC_3, gsiD_1, gsiD_2, gsiD_3 | MPC6_2267, MPC6_4121, MPC6_5806, | Glutathione permease |
| MPC6_2268, MPC6_4120, MPC6_5807 | ||
| gsiA_1, gsiA_2 | MPC6_2269, MPC6_5808 | Glutathione import ATP-binding protein |
| gshAB | MPC6_1518, MPC6_6004 | Glutathione synthetase |
| garB | MPC6_3364 | Glutathione reductase |