Table 3.
Basic information of the genetic map
| LG ID | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | Total |
|---|---|---|---|---|---|---|---|---|---|---|
| Total SLAFs | 498 | 922 | 1539 | 972 | 867 | 469 | 571 | 675 | 181 | 6694 |
| Total SNPs | 961 | 1963 | 2745 | 1949 | 1625 | 920 | 1221 | 1241 | 355 | 12,980 |
| Size (cM) | 121.27 | 99.92 | 153.12 | 126.06 | 78.24 | 61.7 | 93.07 | 88.02 | 59.38 | 880.78 |
| Average Distance | 0.24 | 0.11 | 0.1 | 0.13 | 0.09 | 0.13 | 0.16 | 0.13 | 0.33 | 0.16 |
| Gaps<=5 | 1 | 0.9989 | 0.9987 | 1 | 1 | 0.9979 | 0.9965 | 0.9985 | 0.9833 | 0.9971 |
| Max Gap | 4.44 | 5.53 | 5.75 | 4.25 | 4.61 | 6.33 | 7.13 | 8.41 | 7.63 | 8.41 |
| Total DS | 303 | 10 | 276 | 70 | 540 | 16 | 83 | 18 | 42 | 1358 |
| Singleton(%) | 0 | 0.01 | 0 | 0 | 0 | 0 | 0.01 | 0 | 0.02 | 0.04 |
| Miss (%) | 2.02 | 0.58 | 0.78 | 0.59 | 5.66 | 2.79 | 1.27 | 4.36 | 5.36 | 23.41 |