Table 1.

Macrophage transcriptomes overview.

Original Manuscript	Jablonski et al. (25)	Buscher et al. (22)
Macrophages	Bone marrow-derived, BMDM	Peritoneal macrophages
Activation	LPS (100 ng/mL) +IFN-γ (20 ng/mL), 24 h for Classically activated;	LPS (2 ng/mL) for 4 h
	IL-4 (20 ng/mL), 24 h for Alternatively activated.
Transcriptome	Affymetrix, GSE69607	Affymetrix, GSE38705 Orozco et al. (21)
LPS source	Sigma-Aldrich L2880	List Biological Inc., Campbell, CA
Gene lists	DE between classically activated vs. alternatively activated, filtered for unique genes.	Positively [M1(=LPS+)] or negatively [M2(=LPS–)] correlated with IL-12/arginase-1