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. Author manuscript; available in PMC: 2020 Jun 30.
Published in final edited form as: J Proteomics. 2019 May 4;202:103374. doi: 10.1016/j.jprot.2019.05.002

Table 3.

Selectively released proteins encoded by genes that were salt responsive in RNA-seq experiments

Gene/Protein Description Fold changea (1.25% vs 0.5%)
HP0003 3-deoxy-d-manno-octulosonic acid 8-phosphate synthetase (KdsA) 0.61
HP0089 Pfs; Mtn; MqnB 0.50
HP0204 hypothetical protein 0.54
HP0618 adenylate kinase (Adk) 0.46
HP0630 modulator of drug activity (Mda66) 0.57
HP0865 deoxyuridine 5’-triphosphate nucleotidohydrolase (Dut) 0.60
HP0871 CDP-diglyceride hydrolase (Cdh) 2.77
HP0887 vacuolating cytotoxin (VacA) 1.81
HP1098 hypothetical secreted protein (HcpC) 0.35
HP1099 2-keto-3-deoxy-6-phosphogluconate aldolase (Eda) 0.58
HP1117 hypothetical secreted protein (HcpX) 0.54
HP1118 gamma-glutamyltranspeptidase (Ggt) 0.49
HP1186 carbonic anhydrase 1.85
HP1299 methionine amino peptidase (Map) 0.54
HP1458 thioredoxin-2 (Trx2) 0.43
HP1469 outer membrane protein (Omp31, HorJ) 0.59
a

H. pylori was grown in Brucella broth containing either 0.5% or 1.25% NaCl. RNA-seq was performed as described in the methods. The fold change in transcript levels in response to high salt conditions was then calculated as a ratio (number of RNA-seq reads from cultures containing 1.25% NaCl compared to reads from cultures containing 0.5% NaCl).