Table 5.
Topa Cytosine-Phosphate-Guanine Sites With Associations Between Alcohol Consumption and DNA Methylation That Replicate in Both Blood and in Normal Breast Tissue Samples, Sister Study (2004–2015), Normal Breast Study (2009–2013), and the Cancer Genome Atlas (2012–2016), United States
Probe | Gene | Blood Discovery Set Methylation Coefficient | P Value | Breast Tissue Methylation Coefficient | P Value |
---|---|---|---|---|---|
cg02711608 | SLC1A5 | −0.007 | 4 × 10−12 | −0.07 | 0.02 |
cg06180389 | CD53 | −0.003 | 5 × 10−11 | −0.07 | 0.002 |
cg19566658 | TRIP6 | −0.004 | 4 × 10−10 | −0.08 | 8 × 10−5 |
cg19939077 | PPIF | −0.007 | 9 × 10−10 | −0.06 | 0.006 |
cg19695041 | TACC1 | −0.003 | 1 × 10−9 | −0.04 | 0.03 |
cg06745030 | B3GNT7 | −0.004 | 2 × 10−9 | −0.08 | 0.003 |
cg02583484 | HNRNPA1P10 | −0.006 | 2 × 10−9 | −0.08 | 0.001 |
cg16290996 | SNORD75 | −0.007 | 8 × 10−9 | −0.09 | 0.015 |
cg11701312 | MIR4754 | −0.003 | 2 × 10−8 | −0.06 | 0.009 |
cg03523740 | TXLNA | −0.003 | 2 × 10−8 | −0.05 | 0.004 |
cg02118194 | MYPOP | −0.004 | 3 × 10−8 | −0.05 | 0.0009 |
cg13105234 | N/A | −0.005 | 1 × 10−7 | −0.14 | 0.0001 |
cg17593384 | AFF1 | −0.003 | 2 × 10−7 | −0.07 | 0.03 |
cg17962756 | N/A | −0.004 | 2 × 10−7 | −0.07 | 0.02 |
cg00326958 | HNRNPF | −0.008 | 6 × 10−7 | −0.05 | 0.03 |
cg10143507 | N/A | −0.005 | 8 × 10−7 | −0.05 | 0.001 |
cg06414073 | GAS2L3 | −0.003 | 1 × 10−6 | −0.05 | 0.02 |
cg27479634 | ATP5G2 | −0.005 | 1 × 10−6 | −0.06 | 0.003 |
cg23202985 | N/A | −0.002 | 1 × 10−6 | −0.12 | 4 × 10−7 |
cg22548088 | MLLT1 | −0.002 | 1 × 10−6 | −0.04 | 0.02 |
cg08841048 | ZNF428 | −0.005 | 2 × 10−6 | −0.07 | 0.03 |
cg23598378 | C6orf132 | 0.003 | 3 × 10−6 | 0.09 | 7 × 10−5 |
cg09325711 | RALA | −0.007 | 4 × 10−6 | −0.10 | 0.02 |
cg03756485 | GNPTAB | −0.003 | 5 × 10−6 | −0.12 | 3 × 10−5 |
Abbreviations: AFF1, AF4/FMR2 family member 1; ATP5G2, adenosine triphosphate membrane subunit c2; B3GNT7, β-1,3-N-acetylglucosaminyltransferase 2; C6orf132, chromosome 6 open reading frame 132; CD53, CD53 molecule; GAS2L3, growth arrest specific protein 2-like 3; GNPTAB, N-acetylglucosamine-1-phosphate transferase subunits α and β; HNRNPA1P10, heterogeneous nuclear ribonucleoprotein A1 pseudogene 10; HNRNPF, heterogenous nuclear ribonucleoprotein F; MIR4754, microRNA 4,754; MLLT1, myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog) (translocated to 1); MYPOP, Myb related transcription factor, partner of profiling; N/A, not applicable; PPIF, peptidyl-prolyl cis-trans isomerase; RALA, RAS-like proto-oncogene a; SLC1A5, solute carrier family 1 member 5; SNORD75, small nucleoloar RNA c/d box 75; TACC1, transforming acidic coiled-coil containing protein 1; TRIP6, thyroid receptor-interacting protein 6; TXLNA, taxilin α; ZNF428, zinc finger protein 428.
a Blood association P ≤ 5 × 10−6.