Fig. 7.

Alignment of BrownieCorrector-corrected, Reckoner-corrected and uncorrected paired reads in the neighborhood of a contig breakpoint: the first track contains part of the reference genome, which is assembled into a single contig from BrownieCorrector-corrected data but breaks into two contigs using Reckoner-corrected or uncorrected data. The second track (BrownieCorrector) shows the alignment of the BrownieCorrector-corrected reads. The only the reads in orange are corrected by BrownieCorrector. The third track (Reckoner) shows the alignment of the Reckoner-corrected reads. The fourth track (Uncorrected) shows the alignment of uncorrected reads. Mismatches in the sequencing data are indicated with letters whereas an insertion is shown with a ∣ sign and a deletion is shown with a - sign