Figure 1:

Circos plot comparing the AfunF1 assembly of A. funestus to the updated AfunF3 assembly. AfunF1 scaffolds (colored half of the outer ring) are ordered by majority alignment location onto AfunF3 (black half of the outer ring). Connecting lines indicate pairwise alignments between the 2 assemblies, and crossing lines indicate that part of the AfunF1 scaffold aligns to discordant regions on the AfunF3 chromosome. The first internal ring color corresponds to the AfunF1 scaffold color. The second internal ring represents the orientation of the AfunF1 scaffolds onto AfunF3, where orange is forward and green is reverse.