Table 1.
RNA-seq results for each Leishmania developmental stage.
| Bowtie2 – LbrM2903 |
|||||
|---|---|---|---|---|---|
| Library | Replicate | Total paired-end reads | % of reads per library* | % of mapped reads | % of reads on chromosome 6a |
| Procyclic | 1 | 69,458,528 | 10.25 | 98.5 | 28.46 |
| Procyclic | 2 | 84,539,426 | 12.47 | 98.54 | 30.48 |
| Procyclic | 3 | 90,215,594 | 13.31 | 98.66 | 25.41 |
| Metacyclic | 1 | 72,520,332 | 10.70 | 98.83 | 22.81 |
| Metacyclic | 2 | 84,021,672 | 12.40 | 98.84 | 23.01 |
| Metacyclic | 3 | 66,830,070 | 9.86 | 99.01 | 23.62 |
| Amastigote | 1 | 54,228,698 | 8.00 | 98.95 | 20.40 |
| Amastigote | 2 | 81,757,314 | 12.06 | 98.76 | 22.21 |
| Amastigote | 3 | 74,281,704 | 10.96 | 99.18 | 32.29 |
a The ribosomal locus (18S and 28S) of L. braziliensis is annotated on chromosome 6. Reads mapped on chromosome 6 were referenced to estimate the representation of the rRNA in the samples.
* total reads (9 libraries): ~677 million reads