Table 3.

List of primers used in the study.

Primer Name	Sequence 5ʹ – 3ʹ
GB-VF1194	CATGTTCAATACGGACACGTA
GB-VR	AAGCTTTTCCGCGCTATTGT
InsFspacer	TTCTGGAATGGGATTCAGGATTGTTGATGTGTTGGTATTTGAG
InsRspacer	ATCCGTGTCGTTCTGTCCACTACGTGTCCGTATTGAACATG
orf53A_s1	GCAGAAGAACAGCTACTATTTAAGCAAGAAAC
orf53A_s2	GTTTCTTGCTTAAATAGTAGCTGTTCTTCTG
orf53B_s1	GCTGTTGAATGTGGTTTGATTAATCTTGATACAGC
orf53B_s2	GCTGTATCAAGATTAATCAAACCACATTCAACAG
orf36A_s1	GCCGGGTTAACAAAAACAAAATCTGGTTATTTAAGAG
orf36A_s2	GCTCTTAAATAACCAGATTTTGTTTTTGTTAACCCGG
orf36B_s1	GTAGCTAAATACGTCGGAGTTACCCAGCCAG
orf36B_s2	GCTGGCTGGGTAACTCCGACGTATTTAGCTA
936.101F	GCGAAGCCAACACCTACAAT
936.56R	GCTAAATACGTCGGAGTTAC
936.60F	AGGAGTTTCTGGTTCGTCCC
936.47R	TAGGCGACACCATAACGGTA
936.94F	CTAAGCCCTCTAATTCTCCT
936.36R	CACGCTTGACCGCGATTTAA
936.34F	GAGCAAAGCCTTAGCGATTG
936.92R	GCTAGATAGTCATGGCGATA
SpacerF	Forward RS sequence + AAATACAACCGCTCCTCGATAAAAGGGGACGAGAACCATATGATTCAGGTATTGC Depending on spacer size, the 3ʹ end was shortened to obtain a primer of 90 nt
SpacerR	Reverse complement RS sequence + GTTCTCGTCCCCTTTTATCGAGGAGCGGTTGTATTTAGAGAACTTTAAAAACGTG Depending on spacer size, the 3ʹ end was shortened to obtain a primer of 90 nt
VF-pG9	GTGGACAGAACGACACGGAT
VR-pG9	TCCTGAATCCCATTCCAGAA