Table 1.
RNA | k open(,1) (s−1) | k open,2 (s−1) | k close (s−1) |
---|---|---|---|
10mer | 0.67 | 0.16 | |
14mer | 0.32 | 0.24 | |
20mer | 0.30 | 0.21 | |
30mer | 0.34 | 0.95 | |
50mer | 0.31 | 0.69 | |
10/10mer | 0.30 (33%)a | 5.8 (67%)a | 0.17 |
14/10mer | 0.29 (43%)a | 6.1 (57%)a | 0.17 |
20/10mer | 0.26 (44%)a | 4.4 (56%)a | 0.19 |
30/10mer | 0.21 (48%)a | 0.86 (52%)a | 0.82 |
40/10mer | 0.19 (42%)a | 0.72 (58%)a | 0.91 |
50/10mer | 0.20 (18%)a | 0.59 (82%)a | 1.3 |
30/10mer | 0.39b | 0.82 | |
40/10mer | 0.37b | 0.91 | |
50/10mer | 0.47b | 1.3 |
aValues in brackets are the amplitudes of the slow and fast phases from double-exponential fits.
bRate constant for opening from single-exponential analysis of the CDHs in the presence of 30/10mer, 40/10mer and 50/10mer RNAs.