Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2019 Jun 3;20:117. doi: 10.1186/s13059-019-1720-5

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© The Author(s). 2019

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

PMC Copyright notice

Fig. 1 — SV type specificity of SV detection algorithms. Precision and recall of DELs, DUPs, INSs, and INVs were determined with the simulated (a) and the NA12878 real data (b). Modified F-measures (the combined statistics for precision and recall (see the “Methods” section for details)) are shown for the algorithms indicated with blue (for DEL), red (for DUP), orange (for INS), and purple (for INV) bars. The mean values of the results obtained with the four NA12878 real datasets (three PacBio datasets for long reads) are indicated. The algorithms were categorized according to the methods used to detect SV signals (RP, read pairs; SR, split reads; RD, read depth; AS, assembly; LR, long reads) and their combined methods (RP-SR, RP-RD, RP-AS, RP-SR-AS, and RP-SR-RD)