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. 2019 May 28;10:1131. doi: 10.3389/fmicb.2019.01131

TABLE 1.

Effect of treatment on richness and alpha diversity at 97% similarity after rarefaction to 6,040 sequences per sample for samples collected on weaning day.

Treatment1
Item CON PCON ENZ SE P-value
Shannon index 10.4a 10.2b 10.2b 0.09 0.04
Simpson index 0.9981 0.9976 0.9976 0.00 0.12
Chao1 7,082a 6,729ab 6,626b 181.00 0.05
PD whole tree2 159.0a 151.8b 150.1b 2.63 0.01
Observed OTUs 2,572a 2,421b 2,424b 55.50 0.02

1CON = conventional cow-calf system without supplementation of calves. PCON = calves were creep fed. ENZ = calves were creep fed with an enhanced feed containing xylanase; 2Faith’s Phylogenetic Diversity. a,bMeans within a row with different superscripts differ (P ≤ 0.05) according to Fisher’s Least Significance Difference method.