Table 1.
TCRα/β sequences and MAIT Match scores for six MAIT cell clones and two control clones derived from bronchoalveolar fluid from a patient with tuberculosis
Clone | TCRα sequencing | TCRβ sequencing | |||||
---|---|---|---|---|---|---|---|
TRAV | CDR3α | TRAJ | MAIT Match score | TRBV | CDR3β | TRBJ | |
MAIT cell clones | |||||||
D0033-A1 | 1-2 | CAALDSNYQLIW | 33 | 1.00 | 4-3 | CASSQDMVSITDTQY | 2-3 |
D0033-A2 | 1-2 | CAVTDSNYQLIW | 33 | 1.00 | 3-1 | CASSQAETELNTGELF | 2-2 |
D0033-A3 | 1-2 | CVTMDSNYQLIW | 33 | 0.98 | 6-1 | CASSEAGGGYNEQF | 2-1 |
D0033-A6 | 1-2 | CAVVDSNYQLIW | 33 | 1.00 | 4-2 | CASSHSSGTGGNEQF | 2-1 |
D0033-A8 | 1-2 | CVTMDSNYQLIW | 33 | 0.98 | 6-1 | CASSEAGGGYNEQF | 2-1 |
D0033-A10 | 1-2 | CAVTDSNYQLIW | 33 | 1.00 | 3-1 | CASSSGLEVTGELF | 2-2 |
Control T cell clones | |||||||
D0033-D7 | 20 | CAARFSDGQKLL | 16 | 0.92 | 7-9 | CASSEGTGVEWDGYT | 1-2 |
D0033-E7 | 39 | CAVPGGGADGLT | 45 | 0.85 | 2 | CASVASGVRDTQY | 2-3 |