Table 3.
Gene | Chromosome | HGVS DNA reference | HGVS protein reference | Variant type | Predicted effect (substitution, deletion, etc.) | dbSNP/dbVar ID | Genotype (heterozygous/homozygous) | ClinVar ID (optional) | Parent of origin (optional) | Observed effect (if shown to be different from predicted effect) (optional) | Comments (optional) |
---|---|---|---|---|---|---|---|---|---|---|---|
ETS1 | 11 | c.1044_1049 delCAAGGA insTT | p.Lys349SerfsX2 | Loss of function | Del/ins | PCGC ID 1-01334 | Het | De novo | This insertion/deletion causes a premature termination that likely results in a loss of function of that copy of the gene. |