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. Author manuscript; available in PMC: 2020 Jun 1.
Published in final edited form as: Ticks Tick Borne Dis. 2019 Apr 30;10(4):918–923. doi: 10.1016/j.ttbdis.2019.04.017

Fig. 2. Phylogenetic tree of concatenated gltA, ompA, ompB, sca4, and 16S rRNA gene sequences of ‘Rickettsia monacensis’ str. Humboldt.

Fig. 2.

The tree was generated using neighbor-joining distance method and 1000 bootstrap replicates. Bootstrap values >50% are shown at the nodes. Bar, nucleotide distance. ‘R. monacensis’ str. Humboldt (or Rickettsia endosymbiont Ixodes pacificus) is represented at the top of the tree. Other selected sequences on the tree include: R. aeschlimannii, R. africae, R. akari, R. australis, R. buchneri, R. conorii, R. felis, R. heilongjiangensis, R. honei, R. japonica, R. massiliae, ‘R. monacensis’ str. IrR/Munich, R. montanensis, R. parkeri, R. peacockii, R. philipii, R. raoultii, R. rhipicephali, R. rickettsii, R. sibirica, and R. slovaca. The accession numbers of genes of all Rickettsia species are listed in Supplemental Table.