Table 2.
Comparison between HCC and NC samples. Ratio of the averages and p value of the paired samples t-test
| HCC | NC | Ratio | p value | |
|---|---|---|---|---|
| Number of reads (log10) | 7.7429 | 7.4892 | 0.9672 | 2.62E-15 |
| mtDNA average depth | 49.6176 | 120.0060 | 2.4186 | 1.73E-12 |
| mtDNA total entropy | 0.0011 | 0.0014 | 1.2798 | 1.96E-05 |
| Percentage of the mtDNA genome covered | 99.4562 | 99.6885 | 1.0023 | 0.004217 |
| Percentage of all reads that map to the mtDNA genome | 0.0073 | 0.0388 | 5.3349 | 2.78E-30 |
| Number of polymorphic sites. | 68.4334 | 129.8362 | 1.8973 | 5.86E-06 |