Table 1.
Heterogeneity for methylated probes within a sample of gene promoters in bleomycin-induced transformed clones
β-value1 |
|||
---|---|---|---|
HM450K Probe ID | Gene | Bleo-Transformed | DNA-PKc Bleo-Transformed |
cg16030177 | IRF6 | NM | 0.23 |
cg21951975 | IRF6 | NM | 0.19 |
cg22029157 | IRF6 | NM | 0.19 |
cg09009380 | PKP1 | 0.30 | NM |
cg17463149 | PKP1 | NM | 0.19 |
cg20869257 | PKP1 | 0.23 | 0.28 |
cg01074584 | SFRP1 | NM | 0.30 |
cg10406295 | SFRP1 | NM | 0.55 |
cg13398291 | SFRP1 | 0.76 | NM |
cg15839448 | SFRP1 | NM | 0.43 |
cg21517947 | SFRP1 | NM | 0.42 |
cg22418909 | SFRP1 | NM | 0.59 |
cg24319902 | SFRP1 | NM | 0.48 |
cg01029592 | SOX15 | NM | 0.34 |
cg02256874 | SOX15 | 0.23 | 0.48 |
cg0682989 | SOX15 | 0.55 | 0.43 |
cg06812840 | SOX15 | NM | 0.29 |
cg07488259 | SOX15 | NM | 0.52 |
cg13159929 | SOX15 | 0.95 | NM |
cg13483263 | SOX15 | NM | 0.29 |
cg14187123 | SOX15 | NM | 0.78 |
cg15910588 | SOX15 | 0.30 | 0.74 |
NM = not methylated
A CG was considered methylated when the change in β-value was ≥0.1 compared to vehicle control β-values that were 0.01–0.2.