Table 3:

This table shows genes with the most sex-dependent dysregulation (and their chromosomal position) for the meta-analysis results, sorted by Fisher score and adjusted p-value. In addition, this table shows the Fisher score and adjusted p-value calculated for an analysis repeated without the adjustment of latent batch effects.

	Location	Fisher	Fisher p-adj	Fisher (no SVA)	Fisher p-adj (noSVA)
TTF2	1p13.1	52.80272	0.0080909	30.30688	1.0000000
UTY	Yq11.221	49.17813	0.0352693	45.32043	0.1644908
KCNJ8	12p12.1	48.80700	0.0409512	41.60015	0.7040022
NCS1	9q34.11	48.69443	0.0428454	33.16947	1.0000000
RAP2C	Xq26.2	47.97863	0.0571022	25.06737	1.0000000
CHST11	12q23.3	47.29425	0.0750785	21.86910	1.0000000
MAP1B	5q13.2	47.18032	0.0785676	44.44789	0.2320088
CRHR1	17q21.31	47.15296	0.0794259	43.43498	0.3450932
PAFAH1B1	17p13.3	46.36425	0.1087281	17.26173	1.0000000
SH3BGR	21q22.2	46.35975	0.1089168	32.82178	1.0000000
PAK3	Xq23	45.67211	0.1430652	46.45645	0.1048620
FMO1	1q24.3	44.77510	0.2038808	32.85009	1.0000000
TROVE2	1q31.2	44.42306	0.2341680	21.84958	1.0000000
BNC2	9p22.3-p22.2	44.40285	0.2360233	39.13101	1.0000000
DCUN1D1	3q26.33	44.08602	0.2672865	40.02468	1.0000000
HECA	6q24.1	44.06996	0.2689620	33.92752	1.0000000
RORA	15q22.2	43.52061	0.3335278	34.11106	1.0000000
ARHGAP35	19q13.32	43.40139	0.3494222	41.54671	0.7186470
CAMK1D	10p13	43.34605	0.3570412	23.46336	1.0000000
SLC27A6	5q23.3	43.26356	0.3687130	42.46235	0.5041354
SNX13	7p21.1	43.07811	0.3963678	27.35225	1.0000000
ACKR2	3p22.1	43.06703	0.3980622	36.05068	1.0000000
KCNN2	5q22.3	42.76385	0.4479560	44.03212	0.2731511
TEX35	1q25.2	42.72490	0.4547740	40.79263	0.9608426
TMEM56	1p21.3	42.56794	0.4833811	34.90678	1.0000000
SYTL4	Xq22.1	42.49851	0.4965789	40.68910	0.9997724
AZGP1	7q22.1	42.48820	0.4985441	27.40362	1.0000000