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Linkage disequilibrium (LD) decay in the SYN-DER panel based SNP markers. The locally weighted polynomial regression-based (LOESS) representing decay of r2 along physical distance (kb) is illustrated for a) A-genome chromosomes, b) B-genome chromosomes, and c) D-genome chromosomes. Stacked bar plots of the LD statistic r2 as a function of physical distance (kb) between fraction of SNP pairs in SYN-DER for d) A-genome chromosomes, e) B-genome chromosomes, and f) D-genome chromosomes.
