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. 2019 Apr 24;9(6):1957–1973. doi: 10.1534/g3.119.400010

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Copyright © 2019 Afzal et al.

This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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a) Manhattan plots for SNP-GWAS for GY in WL (inner-most), WW (middle) and DIFF (outer-most) conditions, b) Biplot showing co-localization of GY-GWAS and EigenGWAS highlighting the loci under divergent selections, c) Allelic effects of SNP (IWB1876) on GY across three water regimes, d) Manhattan plots for haplotype-GWAS for GY in WL (inner-most), WW (middle) and DIFF (outer-most) conditions, e) Allelic effects of haplotype (Hap7B-GY1) on GY across three water regimes, f) Allelic effects of SNP (IWB61578) on GY across three water regimes.