Table I. List of HLA peptides derived from the TAA group, identified among the GBM sHLA and mHLA peptidomes.
| Gene name | Sequence | Count # |
||
|---|---|---|---|---|
| sHLA non-cancerous | sHLA GBM | mHLA GBM tissue | ||
| ETV5 | FPDNQRPFL | 0 | 0 | 1 |
| GPAPAPHSL | 0 | 10 | 1 | |
| KVAGERYVY | 0 | 2 | 3 | |
| LPYAEGFAY | 1 | 6 | 2 | |
| MPGPPAHGF | 1 | 0 | 3 | |
| RPAMNYDKL | 1 | 1 | 1 | |
| SOX4 | KIMEQSPDM | 3 | 8 | 4 |
| SAASASAAL | 0 | 17 | 0 | |
| SISNLVFTY | 0 | 4 | 1 | |
| MDM2 | GEISEKAKL | 0 | 10 | 2 |
| YTMKEVLFY | 0 | 0 | 1 | |
| SEQETLVRP | 2 | 1 | 1 | |
| DDR1 | AVGDGPPRV | 0 | 10 | 6 |
| FLAEDALNTV | 1 | 4 | 7 | |
| LPPPPQNSV | 0 | 0 | 0 | |
| YLQVDLQRL | 1 | 6 | 2 | |
| CSF1 | HSSGSVLPLGELE | 2 | 1 | 0 |
| HTVDPGSAKQR | 8 | 6 | 0 | |
| UBE2A | REYEKRVSA | 2 | 6 | 0 |
| RLQEDPPAGV | 1 | 15 | 6 | |
| BST2 | DASAEVERL | 2 | 4 | 0 |
| AAAPQLLIV | 0 | 8 | 0 | |
| VPLIIFTI | 0 | 16 | 1 | |
| NPM1 | DENEHQLSL | 0 | 4 | 1 |
| EGSPIKVTL | 3 | 19 | 2 | |
| EITPPVVLR | 1 | 4 | 0 | |
| FEITPPVVL | 0 | 4 | 2 | |
| HQLSLRTV | 1 | 0 | 0 | |
| MSPLRPQNYLFG | 1 | 0 | 0 | |
| NYEGSPIKVTL | 0 | 0 | 0 | |
| VEAEAMNY | 1 | 5 | 1 | |
| VEAKFINY | 1 | 11 | 2 | |
| YEGSPIKVTL | 0 | 2 | 2 | |
| BCAP31 | AESASEAAKKY | 3 | 8 | 1 |
| KLDVGNAEV | 1 | 11 | 3 | |
| KYMEENDQL | 1 | 3 | 0 | |
| THVLEGAGNKL | 0 | 5 | 1 | |
| CDKN2A | AAPGAPAAV | 0 | 0 | 2 |
| LPVDLAEEL | 0 | 6 | 2 | |
| SART3 | AAFTRALEY | 1 | 10 | 1 |
| AEAPRLAEY | 1 | 10 | 1 | |
| ARLEKVHSL | 0 | 1 | 4 | |
| AYIDFEMKI | 2 | 10 | 0 | |
| DHQVISVTF | 0 | 5 | 1 | |
| TVFVSNLPYSM | 1 | 0 | 0 | |
| PA2G4 | DVAQGTQVTGR | 1 | 2 | 0 |
| IAFPTSISV | 2 | 16 | 1 | |
| KEGEFVAQF | 1 | 4 | 1 | |
| TPIEGMLSH | 0 | 8 | 2 | |
| COTL1 | FVISDRKEL | 4 | 10 | 3 |
| ATIC | KTLTPISAAY | 1 | 4 | 0 |
| NLYPFVKTV | 0 | 3 | 5 | |
| GPNMB | AARLPLDAA | 0 | 3 | 0 |
| ALTSTLISV | 0 | 7 | 4 | |
| AYMREHNQL | 3 | 10 | 1 | |
| IENSPGNVV | 0 | 2 | 0 | |
| IPTEVCTII | 0 | 0 | 1 | |
| KGLSVFLNR | 3 | 1 | 1 | |
| VFLNRAKAVFF | 1 | 1 | 0 | |
| VLTSDSPAL | 0 | 7 | 1 | |
| CDK4 | ALTPVVVTL | 0 | 7 | 5 |
| FGLARIYSY | 1 | 8 | 2 | |
| ISTVREVAL | 3 | 4 | 1 | |
| SOX11 | AHSASEQQL | 0 | 2 | 1 |
| NFSDLVFTY | 0 | 0 | 1 | |