Table 2.
Virulence genes | Annotation | Gene ID (G7) | Identity (%) | Gene ID (NCIB 3610T) | Identity (%) |
---|---|---|---|---|---|
TOXIN | |||||
hlyIII | Hemolysin III | GM002238 | 69.31 | 002367 | 68.1 |
cylR2 | Cytolysin | GM001003 | 40.91 | 000972 | 40.9 |
ADHERENCE | |||||
htpB | Hsp60 | GM000708 | 84.44 | 000629 | 59.68 |
fbpA | FbpA | GM001743 | 51.66 | 001707 | 52.2 |
clpC | ClpC | GM000091 | 78.98 | 000092 | 79 |
ESCAPE | |||||
capA | Capsule | GM003849 | 89.36 | 003872 | 88.21 |
capC | Capsule | GM003850 | 78.38 | 003873 | 79 |
capB | Capsule | GM003851 | 83.7 | 003874 | 83.2 |
capD | Capsule | GM002147 | 76 | 001999 | 78.1 |
cap8B | Capsule | GM003887 | 43.19 | 003789 | 42.8 |
cap8J | Capsule | GM004394 | 43.27 | 004407 | 42.3 |
cap8D | Capsule | GM003681 | 54.3 | 003589 | 53.5 |
cpsD | Capsule | GM003682 | 42.94 | 003590 | 42.77 |
cpsE | Capsule | GM003814 | 40.51 | 003718 | 40.29 |
cps4l | Capsule | GM003820 | 63.51 | 003723 | 62.34 |
hasC | Hyaluronic acid capsule | GM003824 | 55.75 | 003843 | 63.2 |
INTRACELLULAR SURVIVAL | |||||
lplA1 | LplA1 | GM001144 | 65.26 | 001112 | 65.3 |
lspA | Lsp | GM001724 | 57.14 | 001688 | 57.1 |
panD | PanC/PanD | GM002304 | 53.78 | 002431 | 58.7 |
panC | PanC/PanD | GM002305 | 40.79 | 002432 | 43.7 |
SodA | SodA | GM002170 | 43.15 | 002105 | 45.7 |
SodB | SodB | GM002589 | 53.37 | 002710 | 53.4 |
IRON UPTAKE | |||||
fbpC | FbpC | GM000152 | 40 | 002599 | 40.1 |
fbpA | FbpA | GM001743 | 51.66 | 001707 | 52.2 |
fepC | Enterobactin | GM000858 | 46.99 | 000785 | 46.75 |
fbpABC | FbpABC | GM002478 | 40.08 | 002510 | 40.06 |
mbtH | Mycobactin | GM003430 | 56.45 | 003338 | 56.17 |
pvdD | Pyoverdine | GM003431 | 43.21 | 003439 | 43.1 |
entB | Enterobactin | GM003432 | 48.83 | 003452 | 48.8 |
pchD | Pyochelin | GM003433 | 54.81 | 003453 | 60 |
entA | Enterobactin | GM003435 | 42.64 | 003343 | 42.32 |
GENERAL INFECTION | |||||
aur | Aureolysin | GM001636 | 46.98 | 001202 | 41.6 |
mprA | MprAB | GM001477 | 46.22 | 001381 | 45.75 |
mprB | MprAB | GM004336 | 40.54 | 001381 | 40.12 |
vscN | TTSS | GM001802 | 52.61 | 001691 | 51.92 |
hspR | HspR | GM001927 | 40.3 | 001891 | 40.3 |
sigA | SigA | GM002608 | 62.38 | 002730 | 50.5 |
relA | RelA | GM002831 | 44.35 | 002987 | 44.5 |
clpP | ClpP | GM003700 | 77.6 | 003727 | 76.71 |
ureA | Urease | GM003930 | 61.16 | 003951 | 61.5 |
ureB | Urease | GM003931 | 48.28 | 003952 | 49.1 |
ureC | Urease | GM003932 | 57.14 | 003952 | 56.2 |
narL | Nitrate reductase | GM003997 | 40.99 | 004021 | 43.1 |
narH | Nitrate reductase | GM003999 | 56.73 | 004023 | 59.1 |
narG | Nitrate reductase | GM004000 | 49.79 | 004024 | 50.1 |