Table 1.
Top 10 residues likely to display interaction between Twinkle protein and Pol1A or Pol1B as predicted by Direct Coupling Analysis (DCA). Amino acid designations and tri-alanine mutants for each of these residues is also displayed
Twinkle | ||
Residue number | Amino acid | Tri-Alanine Mutant created |
124 | Glu | ∆ 123,124,125 |
126 | Cys | ∆ 126,127,128 |
127 | Pro | |
159 | Leu | ∆ 158,159,160 |
177 | Ala | ∆ 176,177,178 |
185 | Asp | ∆ 184,185,186 |
189 | Lys | ∆ 188,189,190 |
233 | Gly | ∆ 232,233,234 |
430 | Thr | ∆ 429,430,431 |
431 | His | |
Pol1A/B | ||
Residue number | Amino acid (Pol1A/Pol1B) | Tri-Alanine Mutant created* |
118 | Val/Glu | ∆ 117,118,119 |
248 | Arg/Asp | ∆ 247,248,249 |
255 | Val/Glu | ∆ 254,255,256 |
412 | Pro/Lys | ∆ 411,412,413 |
422 | Glu/Asp | ∆ 421,422,423 |
427 | Leu/Lys | ∆ 426,427,428 |
495 | His/Phe | ∆ 494,495,496 |
591 | Val/Lys | ∆ 590,591,592 |
634 | Asn/Val | ∆ 633,634,635 |
695 | Thr/Gly | ∆ 694,695,696 |
*Mutants were created for Pol1A and not Pol1B