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. 2019 Jun 7;12:83. doi: 10.1186/s12920-019-0539-y

Table 1.

PCR and sequencing primersa for bisulfite pyrosequencing

Region Primer Sequence (5′ to 3′) CpGs Chromosomal localization (bp)b Amplicon size (bp) Sequence to analyze
ICR1 Forward TGGGTATTTTTGGAGGTTTTTTT 4 Chr11: 2,020,978 - 2,021,291 314 YGYGTYGTAGGGTTTAYGGGGGTT
Reverse cAACTTAAATCCCAAACCATAACA
Sequencing GTTTYGGGTTATTTAAGTTA
ICR2 Forward TTGTTTATAAGGTGTAGATGGGAG 4 Chr11: 2,720,465 - 2,720,669 205 AYGTTTGTGATTTGGGAYGGTYGYGGGGTATATAGTTTATT
Reverse cTCTCCCAAACTCTCCTCAAC
Sequencing TAGGTTAGGTTGTATTGTTG

aAdopted from Paganini et al., 2015 [12]

bGenomic coordinates are based on Ensembl release 75

cPrimer is biotinylated at the 5′ end