Table 1.
Region | Primer | Sequence (5′ to 3′) | CpGs | Chromosomal localization (bp)b | Amplicon size (bp) | Sequence to analyze |
---|---|---|---|---|---|---|
ICR1 | Forward | TGGGTATTTTTGGAGGTTTTTTT | 4 | Chr11: 2,020,978 - 2,021,291 | 314 | YGYGTYGTAGGGTTTAYGGGGGTT |
Reverse | cAACTTAAATCCCAAACCATAACA | |||||
Sequencing | GTTTYGGGTTATTTAAGTTA | |||||
ICR2 | Forward | TTGTTTATAAGGTGTAGATGGGAG | 4 | Chr11: 2,720,465 - 2,720,669 | 205 | AYGTTTGTGATTTGGGAYGGTYGYGGGGTATATAGTTTATT |
Reverse | cTCTCCCAAACTCTCCTCAAC | |||||
Sequencing | TAGGTTAGGTTGTATTGTTG |
aAdopted from Paganini et al., 2015 [12]
bGenomic coordinates are based on Ensembl release 75
cPrimer is biotinylated at the 5′ end