Table 2.
Patient ID | Tissue type | mRNA | Protein | |||
---|---|---|---|---|---|---|
mRIN | P-value | PIN | P-value | |||
mRNA degraded samples | 33 | Tumor | −0.210 | 1.6E−40 | 0.955 | 0.542 |
35 | Tumor | −0.203 | 3.9E−38 | 0.956 | 0.649 | |
33 | Tumor | −0.161 | 4.6E−25 | 0.949 | 0.187 | |
35 | Benign | −0.127 | 7.9E−17 | 0.947 | 0.133 | |
35 | Tumor | −0.113 | 6.2E−14 | 0.951 | 0.303 | |
37 | Tumor | −0.096 | 1.2E−10 | 0.951 | 0.276 | |
14 | Tumor | −0.087 | 2.6E−09 | 0.951 | 0.286 | |
38 | Tumor | −0.073 | 3.6E−07 | 0.963 | 0.997 | |
37 | Tumor | −0.070 | 7.9E−07 | 0.947 | 0.125 | |
33 | Benign | −0.064 | 4.7E−06 | 0.951 | 0.255 | |
38 | Benign | −0.063 | 6.2E−06 | 0.957 | 0.697 | |
7 | Tumor | −0.053 | 8.6E−05 | 0.955 | 0.542 | |
31 | Tumor | −0.043 | 8.5E−04 | 0.956 | 0.649 | |
Protein degraded samples | 16 | Benign | −0.004 | 0.212 | 0.937 | 9.4E-05 |
10 | Tumor | 0.030 | 0.895 | 0.940 | 0.0015 | |
37 | Benign | −0.028 | 0.012 | 0.941 | 0.0028 | |
12 | Tumor | 0.013 | 0.576 | 0.941 | 0.0052 |
The degraded tissues were significantly degraded at either transcript or protein level (P-value < 0.01). P-values were obtained from the mRIN and PIN algorithm, respectively