Table 3.
Key nodes in stage T1 networks based on Degree and Betweenness centrality measures.
| Gene name | Gene type | DNR-T1 network* | PPR-T1 network* | Some related cancers | Reference (PMID) |
|---|---|---|---|---|---|
| CCNA2 | Protein coding | D | D | Bladder, Breast, Colorectal |
30138038 24622579 30464611 |
| CCNB1 | Protein coding | D | D | Bladder, Breast, Gastric |
30170380 28821558 30518842 |
| PARPBP | Protein coding | D | D | Pancreatic | 23436799 |
| NCAPD2 | Protein coding | D | D | Ovarian | 21423607 |
| RFC3 | Protein coding | D | D | Breast, Ovarian, Esophageal |
27888707 26464638 22328562 |
| MCM7 | Protein coding | D | D | Bladder, Lung |
23201130 27797825 |
| KPNA2 | Protein coding | D | D | Bladder, Lung, Colorectal |
27611951 27009856 26663089 |
| ASF1B | Protein coding | D | D | Breast | 21179005 |
| LMNB1 | Protein coding | D | — | Liver, Cervical |
19522540 30394198 |
| CDC25A | Protein coding | — | D | Bladder, Breast, Ovarian |
29246203 30443946 30405749 |
| NUP214 | Protein coding | B | — | Leukemia | 25120641 |
| RPLP0P6 | Pseudogene | B | B | — | — |
| NR2F1-AS1 | lncRNA | B | — | Hepatocellular carcinoma | 29602203 |
| YWHAH | Protein coding | B | — | Glioma | 26370624 |
| GAPDHP1 | Pseudogene | D, B | B | — | — |
| NRAS | Protein coding | B | B | Bladder, Colorectal, Melanoma |
21072204 22820081 28074351 |
| LINC01355 | lncRNA | B | — | Lung | 28949095 |
| GLI2 | Protein coding | B | — | Bladder, Gastric |
27465044 28975979 |
| CCNT2 | Protein coding | B | — | leukemia | 28409330 |
| EEF1A1P13 | Pseudogene | B | — | — | — |
| FASN | Protein coding | — | D | Bladder, Breast |
30221356 28922023 |
| ANXA2P2 | Pseudogene | — | B | — | — |
| HCG18 | lncRNA | — | B | Bladder | 30426533 |
| NCOR2 | Protein coding | — | B | Lung | 29764865 |
| COL1A2 | Protein coding | — | B | Bladder, Gastric |
27655672 28401451 |
| MEG3 | lncRNA | — | B | Bladder, Gastric, Esophageal, Glioma, Breast, Ovarian |
30461333 30417553 30310931 28975980 28539329 30389444 |
| ENO1 | Protein coding | — | B | Pancreatic, Gastric, Colorectal |
28086938 29986635 26097998 |
| CDC25B | Protein coding | — | B | Bladder, Endometrial, Gastric |
29234286 29353204 27863420 |
*D: Degree, B: Betweenness.